Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015955234.1_cds_XP_016493812.1_83881
CDS Infomation

[gene=LOC107813114] [db_xref=GeneID:107813114] [protein=aspartic proteinase nepenthesin-1] [protein_id=XP_016493812.1] [location=complement(37282..38730)] [gbkey=CDS]
Sequence

ATGGCTTCTTCCTCTGTTTTCTTCACTCTTTTCACTTTCTTCTCACTCTTCCTTTTCTCC
TCCTCCGCAGAAACATTAGTTTTCCCTTTAACACATTCTTTCTCGAAAACCCAATACAAC
AGTACTCATCAGCTCCTCAAATCCACCTCCGCTCGCTCCGCCACTCGCCTCCACCACCAC
CGTCAAGTCTCCCTCCCTCTCACTCCAGGAAGTGATTACACGCTCTCCTTTTCCCTTGGC
TCTCAAACTATTTCCCTCTACATGGATACTGGAAGCGACGTCGTTTGGCTCCCTTGCCAC
CCTTTTGACTGTATTCTATGTGAAGGCAAGTATAACCCTTGTACTATCCCTAACCCGGGC
CCACTTAATCTCACCTCTGCTGTCCCCGTCACGTGCAAGTCACGCTCCTGCTCCGCCGTC
CACTCCTCTATGTCTTCCTCTAACCTCTGCGCTATGGCGAAATGCCCGCTCGAAGACATT
GAAATTTCCGACTGTAAATCTTACACGTGTCCACCTTTTTACTATGCTTATGGCGACGGG
AGTTTCATTGCGAAATTATATAGCGATAAATTATCAATGCCCACGTCATCGCCGTCGTCG
CTAATTTTGCATAATTTTACGTTCGGCTGTGCTCACAGTGCACTTGGTGAACCTATTGGA
GTAGCTGGTTTTGGCCGTGGGAGACTTTCTTTACCGGCTCAACTCGCTATTAACTCACCG
GAAATCGGAAATTTCTTCTCTTATTGCTTGGTTTCTCATTCTTTTGATACTACAAAAGTT
CGTAAACCGAGTCCGCTCATTCTCGGTCGTTACTCAGTTGATGAAAAAATGAAGCAAATG
AAAGATTACGAAATTGGTTATGCTTATACTCCTATGCTCGAAAATCCAAAACACCCGTAT
TTTTACTGCGTCGGACTTGAAGCAGTGACTATAGGGAAAATGAAGATTCCGGCGCCGGCG
AGTTTGCGGCGAGTCGACGGCAGAGGAAACGGGGGAATGGTGGTGGATTCTGGTACGACT
TTTACTATGTTGCCGCATGTGTTTTATGAAACAGTGGTAACTGAATTTGATAAACGAGTT
GGACCGGTTTATAAGCGAGCGAACCCGGTCGAGGAACGAACCGGGCTTAGCCCGTGTTAC
TATTTGGATAAGGGTTCTTCAAATGTGCCACAGCTGCTTTTACATTTTGGGGGTAATTCC
AGTGTGGTGATGCCTAAGAGGAATTACTTTTATGAATTTTTGGACGGTGGAGATGATGGG
AAGTTAAAAAGGAAAGTGGGGTGTGTGATGCTGATGAACGGTGGTGTTGAAGAGGAAAGT
GGGCCCGCTGGGTTATTGGGTAATTATCAGCAACAAGGGTTTGAGGTTGTTTATGATTTG
GAAAAGAAGAGAGTTGGATTTGCCAGGAGGAAGTGCGCATCTTTGTGGGATGATTTGAAC
CAGCACTAA

Peptide Sequence

PEP ID

XP_016493812.1
PEP Infomation

PREDICTED: aspartic proteinase nepenthesin-1 [Nicotiana tabacum]
Sequence

MASSSVFFTLFTFFSLFLFSSSAETLVFPLTHSFSKTQYNSTHQLLKSTSARSATRLHHH
RQVSLPLTPGSDYTLSFSLGSQTISLYMDTGSDVVWLPCHPFDCILCEGKYNPCTIPNPG
PLNLTSAVPVTCKSRSCSAVHSSMSSSNLCAMAKCPLEDIEISDCKSYTCPPFYYAYGDG
SFIAKLYSDKLSMPTSSPSSLILHNFTFGCAHSALGEPIGVAGFGRGRLSLPAQLAINSP
EIGNFFSYCLVSHSFDTTKVRKPSPLILGRYSVDEKMKQMKDYEIGYAYTPMLENPKHPY
FYCVGLEAVTIGKMKIPAPASLRRVDGRGNGGMVVDSGTTFTMLPHVFYETVVTEFDKRV
GPVYKRANPVEERTGLSPCYYLDKGSSNVPQLLLHFGGNSSVVMPKRNYFYEFLDGGDDG
KLKRKVGCVMLMNGGVEEESGPAGLLGNYQQQGFEVVYDLEKKRVGFARRKCASLWDDLN
QH

Transcript Sequence

Gene sequence data has not been registered.